STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU37776.1KEGG: vap:Vapar_3169 transcriptional regulator, IclR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR. (279 aa)    
Predicted Functional Partners:
ADU37775.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: vap:Vapar_3168 short chain dehydrogenase.
 
    0.843
ADU37774.1
PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; KEGG: vap:Vapar_3167 hypothetical protein; Belongs to the TPP enzyme family.
 
     0.824
ADU37984.1
KEGG: dac:Daci_0043 IclR family transcriptional regulator; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR.
  
     0.772
ADU34407.1
KEGG: vap:Vapar_0160 transcriptional regulator, IclR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR.
  
     0.771
nadX
Aspartate dehydrogenase; Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate.
 
    0.767
ADU37778.1
PFAM: Cupin 2 conserved barrel domain protein; KEGG: vap:Vapar_3171 cupin 2 conserved barrel domain protein.
 
  
 0.753
ADU37771.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: vap:Vapar_3164 glyoxalase/bleomycin resistance protein/dioxygenase.
 
    0.741
ADU34918.1
TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; KEGG: rfr:Rfer_0869 hypothetical protein; SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1.
  
    0.738
ADU37777.1
PFAM: alpha/beta hydrolase fold; KEGG: vap:Vapar_3170 alpha/beta hydrolase fold protein.
 
   
 0.712
ADU37772.1
PFAM: Aldehyde Dehydrogenase; KEGG: vap:Vapar_3165 betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.691
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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