STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU37786.1PFAM: protein of unknown function DUF6 transmembrane; KEGG: mxa:MXAN_1323 hypothetical protein. (279 aa)    
Predicted Functional Partners:
ADU37785.1
KEGG: adg:Adeg_1863 ribulose bisphosphate carboxylase, type III; PFAM: ribulose bisphosphate carboxylase large chain; Ribulose bisphosphate carboxylase, large subunit-like; Belongs to the RuBisCO large chain family.
       0.773
ADU37327.1
PFAM: peptidase M48 Ste24p; KEGG: vap:Vapar_2898 peptidase M48 Ste24p.
 
     0.610
ADU37787.1
Phosphoribulokinase; KEGG: min:Minf_1683 phosphoribulokinase; manually curated.
       0.590
ADU37432.1
PFAM: protein of unknown function DUF1688; KEGG: vap:Vapar_2662 protein of unknown function DUF1688.
  
   
 0.408
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.