STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU37898.1SMART: protein phosphatase 2C domain protein; KEGG: vap:Vapar_2176 protein serine/threonine phosphatase. (264 aa)    
Predicted Functional Partners:
ADU39119.1
KEGG: vap:Vapar_4327 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain.
 
 
 0.840
ADU34777.1
KEGG: vap:Vapar_0519 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain.
 
 
 0.834
ADU37114.1
KEGG: vap:Vapar_0215 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain.
 
 
 0.832
ADU38214.1
KEGG: vap:Vapar_3527 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; Protein phosphatase 2C-like; SMART: serine/threonine protein kinase; protein phosphatase 2C domain protein; Tyrosine-protein kinase, catalytic domain.
 
 
 0.796
ADU37911.1
KEGG: vap:Vapar_2165 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; biotin/lipoyl attachment domain-containing protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region.
  
 0.747
ADU40063.1
KEGG: vap:Vapar_5188 FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein.
 
 
 0.716
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
   0.627
ADU37896.1
SMART: helicase c2; KEGG: vap:Vapar_2178 helicase C2.
  
   0.591
ADU37897.1
PFAM: protein of unknown function DUF465; KEGG: vap:Vapar_2177 protein of unknown function DUF465.
       0.563
ADU37919.1
PFAM: glutaredoxin; KEGG: vap:Vapar_2157 glutaredoxin.
  
 
   0.510
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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