STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU38076.1PFAM: protein of unknown function DUF333; KEGG: ctt:CtCNB1_2852 putative hemolysin. (81 aa)    
Predicted Functional Partners:
ADU38075.1
KEGG: vap:Vapar_1032 hypothetical protein.
       0.773
ADU39721.1
PFAM: Fimbrial protein domain-containing protein; KEGG: kpu:KP1_0597 fimbrial protein.
  
     0.559
ADU39720.1
PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: bpr:GBP346_A2159 fimbrial assembly chaperone protein.
  
     0.518
ADU39719.1
PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: bma:BMA1023 outer membrane usher protein.
  
     0.500
ADU38074.1
KEGG: rrs:RoseRS_0282 hypothetical protein.
       0.468
ADU35000.1
PFAM: glycosyl transferase group 1; KEGG: rcu:RCOM_0077400 hypothetical protein.
  
     0.425
ADU35154.1
PFAM: glycosyl transferase group 1; KEGG: gox:GOX1125 glycosyltransferase.
  
     0.405
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.