STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU38434.1PFAM: KDPG and KHG aldolase; KEGG: vap:Vapar_3691 KDPG and KHG aldolase. (215 aa)    
Predicted Functional Partners:
ADU38433.1
KEGG: vap:Vapar_3690 2-dehydro-3-deoxygalactonokinase; PFAM: 2-keto-3-deoxy-galactonokinase.
 
  
 0.996
ADU38451.1
TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; KEGG: vap:Vapar_3707 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase.
 
  
 
0.853
ADU38432.1
KEGG: vap:Vapar_3689 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; Belongs to the IlvD/Edd family.
  
  
 0.820
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
 
  
 0.739
ADU36406.1
PFAM: PfkB domain protein; KEGG: vap:Vapar_3414 PfkB domain protein.
 
  
 0.674
ADU38431.1
KEGG: vap:Vapar_3688 GntR domain protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
 
   
 0.657
ADU38435.1
PFAM: class II aldolase/adducin family protein; KEGG: vap:Vapar_3692 hypothetical protein.
     
 0.651
edd
6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
 
  
 0.588
ADU35024.1
KEGG: vap:Vapar_0783 galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein.
 
  
 0.580
ADU36102.1
TIGRFAM: galactarate dehydratase; KEGG: vap:Vapar_1721 galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein.
 
  
 0.538
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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