STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU38461.1PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: vap:Vapar_3717 TonB-dependent receptor. (701 aa)    
Predicted Functional Partners:
ADU36801.1
KEGG: vap:Vapar_2394 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug.
 
   
 0.720
ADU38462.1
KEGG: vap:Vapar_3718 hypothetical protein.
       0.576
ADU38346.1
KEGG: hba:Hbal_2175 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug.
  
   
 0.571
ADU34842.1
KEGG: vap:Vapar_1120 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug.
 
   
 0.554
msrA-2
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
       0.546
ADU38032.1
TonB-dependent siderophore receptor; KEGG: azl:AZL_004810 iron complex outermembrane recepter protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug.
 
   
 0.545
ADU34276.1
KEGG: vap:Vapar_0048 cobyrinic acid ac-diamide synthase.
  
 
 
 0.522
ADU36265.1
KEGG: vap:Vapar_1807 TonB family protein; TIGRFAM: TonB family protein; PFAM: TonB domain.
 
 
 
 0.517
ADU37393.1
TIGRFAM: cellulose synthase operon protein YhjQ; KEGG: bpy:Bphyt_5835 cellulose synthase operon protein YhjQ.
  
 
 
 0.515
ADU37313.1
anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: neu:NE1191 putative transmembrane sensor.
 
   
 0.503
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.