STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU38496.1KEGG: vap:Vapar_3746 amino acid adenylation domain protein; TIGRFAM: amino acid adenylation domain protein; PFAM: condensation domain protein; AMP-dependent synthetase and ligase; phosphopantetheine-binding. (1766 aa)    
Predicted Functional Partners:
ADU38495.1
PFAM: Beta-ketoacyl synthase; Acyl transferase; KR domain protein; phosphopantetheine-binding; KEGG: vap:Vapar_3745 KR domain protein.
0.999
ADU38497.1
PFAM: Thioesterase; KEGG: vap:Vapar_3749 thioesterase.
 
  
 0.996
ADU38686.1
Amino acid adenylation domain protein; KEGG: bsu:BSU31960 siderophore 2,3-dihydroxybenzoate-glycine-threonine trimeric ester bacillibactin synthetase; TIGRFAM: amino acid adenylation domain protein; thioester reductase domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Male sterility domain.
 
 
0.996
ADU38498.1
PFAM: MbtH domain protein; KEGG: vap:Vapar_3750 MbtH domain protein.
 
 
 0.994
ADU38493.1
Manually curated; TIGRFAM: amino acid adenylation domain protein; KEGG: dac:Daci_4753 amino acid adenylation domain-containing protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Thioesterase.
 
 
0.992
ADU37078.1
KEGG: vap:Vapar_3185 amino acid adenylation domain protein; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding.
 
0.991
ADU37079.1
KEGG: vap:Vapar_3184 amino acid adenylation domain protein; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; Beta-ketoacyl synthase; Acyl transferase; aminotransferase class-III.
 
0.991
ADU38684.1
PFAM: MbtH domain protein; KEGG: sco:SCO3218 hypothetical protein.
 
 
 0.975
ADU38501.1
PFAM: 4'-phosphopantetheinyl transferase; KEGG: scl:sce5058 4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
 
 
 0.942
ADU39615.1
PFAM: cytochrome P450; flavodoxin/nitric oxide synthase; FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: vap:Vapar_4796 cytochrome P450.
 
 0.936
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.