STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU38511.1KEGG: vap:Vapar_4353 ABC transporter related; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase. (270 aa)    
Predicted Functional Partners:
ADU38513.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vap:Vapar_4351 binding-protein-dependent transport systems inner membrane component.
  
 0.961
ADU38514.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vap:Vapar_4350 binding-protein-dependent transport systems inner membrane component.
  
 0.953
ADU38607.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_4292 binding-protein-dependent transport systems inner membrane component.
  
 0.924
ADU35393.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vap:Vapar_1092 binding-protein-dependent transport systems inner membrane component.
  
 0.876
ADU38512.1
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: vap:Vapar_4352 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
  
0.873
ADU35514.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_3326 binding-protein-dependent transport systems inner membrane component.
  
 0.852
ADU39164.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vap:Vapar_4351 binding-protein-dependent transport systems inner membrane component.
  
 0.839
ADU35911.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vap:Vapar_1554 binding-protein-dependent transport systems inner membrane component.
  
 0.829
ADU37655.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: reh:H16_A2084 ABC transporter permease.
  
 0.829
ADU39163.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vap:Vapar_4350 binding-protein-dependent transport systems inner membrane component.
  
 0.802
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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