STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (399 aa)    
Predicted Functional Partners:
ADU38555.1
KEGG: vap:Vapar_3808 phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase.
 
 0.997
ADU38571.1
KEGG: vap:Vapar_3825 sulfoacetaldehyde acetyltransferase; TIGRFAM: sulfoacetaldehyde acetyltransferase; PFAM: thiamine pyrophosphate central domain-containing protein; thiamine pyrophosphate TPP-binding domain-containing protein; Belongs to the TPP enzyme family.
    
 0.978
ADU37904.1
propionate/CoA ligase; KEGG: vap:Vapar_2170 propionyl-CoA synthetase; TIGRFAM: propionate/CoA ligase; PFAM: AMP-dependent synthetase and ligase.
   
 
 0.927
ADU34546.1
PFAM: Aldehyde Dehydrogenase; KEGG: vap:Vapar_0310 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.920
ADU34838.1
PFAM: Aldehyde Dehydrogenase; KEGG: rhi:NGR_b06980 aldehyde dehydrogenase.
  
 
 0.920
ADU35302.1
PFAM: Aldehyde Dehydrogenase; KEGG: bbt:BBta_7827 putative membrane-anchored aldehyde dehydrogenase protein; Belongs to the aldehyde dehydrogenase family.
  
 
 0.920
ADU36724.1
PFAM: Aldehyde Dehydrogenase; KEGG: vap:Vapar_2344 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.920
ADU38508.1
PFAM: Aldehyde Dehydrogenase; KEGG: pfl:PFL_3648 aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
  
 
 0.920
ADU39502.1
PFAM: acylphosphatase; KEGG: vap:Vapar_4711 acylphosphatase.
    
 0.917
ADU38084.1
PFAM: CoA-binding domain protein; ATP-grasp domain protein; KEGG: vap:Vapar_6147 CoA-binding domain protein.
    
 0.915
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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