STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU38639.1KEGG: vap:Vapar_4439 two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR. (155 aa)    
Predicted Functional Partners:
ADU37302.1
KEGG: pol:Bpro_2542 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
 
 
 0.812
ADU36772.1
KEGG: cti:RALTA_B2069 putative sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
 
 
 0.805
ADU37062.1
KEGG: pol:Bpro_2542 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
 
 
 0.803
ADU35215.1
Putative signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: vap:Vapar_0940 putative signal transduction histidine kinase.
 
 
 0.783
ADU38313.1
Integral membrane sensor signal transduction histidine kinase; KEGG: vap:Vapar_3594 histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
 
 
 0.782
ADU37648.1
Integral membrane sensor signal transduction histidine kinase; KEGG: vap:Vapar_6034 histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
 
 
 0.762
ADU39282.1
KEGG: rfr:Rfer_2039 two component LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver.
  
     0.760
ADU39189.1
Two component transcriptional regulator, LuxR family; Manually curated; PFAM: response regulator receiver; regulatory protein LuxR; KEGG: vap:Vapar_4377 two component transcriptional regulator, LuxR family; SMART: regulatory protein LuxR; response regulator receiver.
  
     0.758
ADU35502.1
KEGG: svi:Svir_02200 two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver.
  
     0.757
ADU38937.1
Multi-sensor signal transduction histidine kinase; KEGG: vap:Vapar_4109 histidine kinase; PFAM: ATP-binding region ATPase domain protein; CHASE3 domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein.
 
 
 0.741
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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