STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU38683.1Rhamnosyltransferase; KEGG: bgl:bglu_2g05680 rhamnosyltransferase. (323 aa)    
Predicted Functional Partners:
ADU38682.1
PFAM: major facilitator superfamily MFS_1; KEGG: xcv:XCV4394 drug:H+ antiporter-1 family protein.
  
  
 0.824
ADU38684.1
PFAM: MbtH domain protein; KEGG: sco:SCO3218 hypothetical protein.
       0.773
ADU38685.1
Glycosyltransferase, MGT family; KEGG: aav:Aave_4659 UDP-glucuronosyl/UDP-glucosyltransferase; TIGRFAM: glycosyltransferase, MGT family; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase.
  
  
 0.767
ADU38686.1
Amino acid adenylation domain protein; KEGG: bsu:BSU31960 siderophore 2,3-dihydroxybenzoate-glycine-threonine trimeric ester bacillibactin synthetase; TIGRFAM: amino acid adenylation domain protein; thioester reductase domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Male sterility domain.
  
  
 0.742
ADU35311.1
KEGG: vap:Vapar_1192 undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase.
  
  
 0.709
ADU37061.1
TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: vap:Vapar_3200 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase.
  
  
 0.525
ADU34996.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.507
ADU34991.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
  
 0.493
ADU34990.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
 
  
 0.456
ADU34989.1
KEGG: vap:Vapar_0752 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.455
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.