STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU38798.1KEGG: vap:Vapar_3992 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR. (228 aa)    
Predicted Functional Partners:
ADU38799.1
Integral membrane sensor signal transduction histidine kinase; KEGG: vap:Vapar_3993 histidine kinase; PFAM: Cache type 2 domain protein; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
 
   
 0.949
ADU38937.1
Multi-sensor signal transduction histidine kinase; KEGG: vap:Vapar_4109 histidine kinase; PFAM: ATP-binding region ATPase domain protein; CHASE3 domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein.
 
 
 0.846
ADU37302.1
KEGG: pol:Bpro_2542 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
 
 
 0.840
ADU37062.1
KEGG: pol:Bpro_2542 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
 
 
 0.834
ADU37648.1
Integral membrane sensor signal transduction histidine kinase; KEGG: vap:Vapar_6034 histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
 
 
 0.811
ADU36772.1
KEGG: cti:RALTA_B2069 putative sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
 
 
 0.808
ADU38313.1
Integral membrane sensor signal transduction histidine kinase; KEGG: vap:Vapar_3594 histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
 
 
 0.795
ADU34621.1
Putative signal transduction histidine kinase; KEGG: vap:Vapar_0380 histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
 
 
 0.747
ADU38639.1
KEGG: vap:Vapar_4439 two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR.
  
     0.738
ADU35215.1
Putative signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: vap:Vapar_0940 putative signal transduction histidine kinase.
 
 
 0.701
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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