STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU38819.1PFAM: protein of unknown function DUF344; KEGG: vap:Vapar_4019 protein of unknown function DUF344. (307 aa)    
Predicted Functional Partners:
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
  
 0.964
ppa
Inorganic diphosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
    
 0.915
ADU38820.1
PFAM: phosphate transporter; KEGG: pau:PA14_05870 putative phosphate transporter.
  
  
 0.661
ADU35274.1
PFAM: OmpW family protein; KEGG: vap:Vapar_0989 OmpW family protein.
   
    0.626
ADU38818.1
KEGG: vap:Vapar_4018 hypothetical protein.
       0.623
ADU38821.1
PFAM: Mg2 transporter protein CorA family protein; KEGG: vap:Vapar_4020 Mg2 transporter protein CorA family protein.
       0.547
ADU34882.1
KEGG: dol:Dole_3058 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; glycosyl transferase group 1; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB.
   
    0.537
ADU37848.1
KEGG: vap:Vapar_2225 radical SAM domain protein; PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
   
    0.537
ADU38714.1
PFAM: Di-haem cytochrome c peroxidase; KEGG: bxe:Bxe_B0346 putative cytochrome c peroxidase.
  
    0.475
ADU36688.1
KEGG: vap:Vapar_2310 Ppx/GppA phosphatase; PFAM: Ppx/GppA phosphatase.
 
  
 0.437
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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