STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU38849.1PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: vap:Vapar_1929 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (361 aa)    
Predicted Functional Partners:
ADU38850.1
PFAM: transferase hexapeptide repeat containing protein; KEGG: vap:Vapar_1928 transferase hexapeptide repeat containing protein.
 
 0.997
ADU38851.1
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: vap:Vapar_1927 oxidoreductase domain protein.
 
 
 0.995
ADU35311.1
KEGG: vap:Vapar_1192 undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase.
  
 0.912
ADU38852.1
KEGG: vap:Vapar_1926 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.901
ADU35765.1
PFAM: Methyltransferase type 12; KEGG: tin:Tint_1186 glycosyl transferase family 2.
  
  
 0.889
ADU38836.1
PFAM: polysaccharide biosynthesis protein CapD; KEGG: vap:Vapar_1939 polysaccharide biosynthesis protein CapD.
 
  
 0.886
ADU38843.1
KEGG: saf:SULAZ_0354 glycosyl transferase, group 1; manually curated; PFAM: glycosyl transferase group 1.
 
  
 0.839
ADU34989.1
KEGG: vap:Vapar_0752 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.738
ADU38847.1
Hypothetical protein; Manually curated; KEGG: gtn:GTNG_1832 maltose transacetylase (maltoseO-acetyltransferase).
 
  
 0.737
ADU38841.1
KEGG: pna:Pnap_3481 sugar transferase; manually curated; PFAM: sugar transferase.
  
 0.731
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.