Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADU36472.1 | ADU38872.1 | Varpa_2267 | Varpa_4709 | PFAM: major facilitator superfamily MFS_1; KEGG: vap:Vapar_3357 major facilitator superfamily MFS_1. | KEGG: vap:Vapar_4044 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase. | 0.622 |
ADU38872.1 | ADU36472.1 | Varpa_4709 | Varpa_2267 | KEGG: vap:Vapar_4044 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase. | PFAM: major facilitator superfamily MFS_1; KEGG: vap:Vapar_3357 major facilitator superfamily MFS_1. | 0.622 |
ADU38872.1 | ADU38873.1 | Varpa_4709 | Varpa_4710 | KEGG: vap:Vapar_4044 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase. | KEGG: vap:Vapar_4045 general substrate transporter. | 0.554 |
ADU38872.1 | ADU38876.1 | Varpa_4709 | Varpa_4713 | KEGG: vap:Vapar_4044 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase. | KEGG: vap:Vapar_4048 cytochrome o ubiquinol oxidase, subunit III; TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III. | 0.407 |
ADU38873.1 | ADU38872.1 | Varpa_4710 | Varpa_4709 | KEGG: vap:Vapar_4045 general substrate transporter. | KEGG: vap:Vapar_4044 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase. | 0.554 |
ADU38873.1 | ADU38876.1 | Varpa_4710 | Varpa_4713 | KEGG: vap:Vapar_4045 general substrate transporter. | KEGG: vap:Vapar_4048 cytochrome o ubiquinol oxidase, subunit III; TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III. | 0.733 |
ADU38876.1 | ADU38872.1 | Varpa_4713 | Varpa_4709 | KEGG: vap:Vapar_4048 cytochrome o ubiquinol oxidase, subunit III; TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III. | KEGG: vap:Vapar_4044 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase. | 0.407 |
ADU38876.1 | ADU38873.1 | Varpa_4713 | Varpa_4710 | KEGG: vap:Vapar_4048 cytochrome o ubiquinol oxidase, subunit III; TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III. | KEGG: vap:Vapar_4045 general substrate transporter. | 0.733 |