STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU38934.1PFAM: AsmA family protein; KEGG: vap:Vapar_4106 AsmA family protein. (670 aa)    
Predicted Functional Partners:
ADU34587.1
KEGG: vap:Vapar_0350 poly(hydroxyalkanoate) granule-associated protein; TIGRFAM: poly(hydroxyalkanoate) granule-associated protein; PFAM: poly granule associated family protein.
  
     0.586
ADU36153.1
KEGG: vap:Vapar_1770 hypothetical protein.
  
  
 0.580
ADU38935.1
KEGG: vap:Vapar_4107 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.
 
     0.550
ADU37897.1
PFAM: protein of unknown function DUF465; KEGG: vap:Vapar_2177 protein of unknown function DUF465.
  
     0.520
ADU34941.1
KEGG: vap:Vapar_1997 hypothetical protein.
  
  
 0.507
ADU36974.1
PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: sjp:SJA_C1-07060 P pilus assembly protein, porin PapC.
  
     0.485
ADU37167.1
PFAM: protein of unknown function DUF1458; KEGG: vap:Vapar_2850 protein of unknown function DUF1458.
   
    0.481
ADU35918.1
PFAM: protein of unknown function DUF1428; KEGG: psl:Psta_0669 protein of unknown function DUF1428.
   
    0.478
ADU39235.1
PFAM: protein of unknown function DUF1428; KEGG: vap:Vapar_4414 protein of unknown function DUF1428.
   
    0.478
ADU38938.1
PFAM: protein of unknown function DUF1328; KEGG: vap:Vapar_4110 hypothetical protein.
 
    0.434
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.