STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU39062.1PFAM: flavin reductase domain protein FMN-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aau:AAur_0247 putative monooxygenase component B. (578 aa)    
Predicted Functional Partners:
ADU39064.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dac:Daci_1790 short chain dehydrogenase.
 
 
 0.866
ADU39063.1
KEGG: dac:Daci_1791 putative dehydrogenase/oxygenase subunit (flavoprotein).
 
   
0.766
ADU39061.1
KEGG: dac:Daci_1793 carboxymethylenebutenolidase.
 
    0.701
ADU39065.1
KEGG: dac:Daci_1789 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
 
     0.683
ADU36541.1
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
  
 
 0.516
ADU35089.1
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: vap:Vapar_3374 electron transfer flavoprotein alpha/beta-subunit.
  
 
 0.475
ADU36452.1
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: vap:Vapar_3374 electron transfer flavoprotein alpha/beta-subunit.
  
 
 0.475
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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