STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU39066.1PFAM: Integral membrane protein TerC; KEGG: vap:Vapar_5729 integral membrane protein TerC. (249 aa)    
Predicted Functional Partners:
ADU38983.1
PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: vap:Vapar_4210 protein of unknown function DUF21.
 
    0.852
ADU38634.1
PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: vap:Vapar_3855 protein of unknown function DUF21.
 
    0.829
ADU39067.1
PFAM: Extracellular ligand-binding receptor; KEGG: rpf:Rpic12D_2746 extracellular ligand-binding receptor.
       0.518
ADU40065.1
PFAM: Integral membrane protein TerC; KEGG: vap:Vapar_5190 integral membrane protein TerC.
  
     0.430
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.