STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU39069.1PFAM: Roadblock/LC7 family protein; KEGG: ttu:TERTU_4500 roadblock/LC7 domain protein. (136 aa)    
Predicted Functional Partners:
ADU39070.1
PFAM: protein of unknown function ATP binding; KEGG: ttu:TERTU_4499 small GTP-binding protein.
 
 
 0.987
ADU37204.1
PFAM: protein of unknown function ATP binding; KEGG: dac:Daci_0776 protein of unknown function ATP binding.
 
 
 0.951
ADU39071.1
Hypothetical protein; KEGG: sus:Acid_6381 lipopolysaccharide heptosyltransferase II.
       0.773
ADU34245.1
PFAM: Exosortase EpsH-related; KEGG: vap:Vapar_0021 hypothetical protein.
  
     0.734
ADU38719.1
KEGG: vap:Vapar_5943 conserved repeat domain protein; TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11.
  
     0.701
ADU39068.1
KEGG: ttu:TERTU_4502 hypothetical protein.
 
     0.696
ADU39072.1
KEGG: mpt:Mpe_A3408 pilus tip-associated protein.
       0.675
ADU39073.1
KEGG: mpt:Mpe_A3407 hypothetical protein.
       0.675
ADU39074.1
KEGG: mpt:Mpe_A3406 fimbrial biogenesis protein.
       0.675
ADU39075.1
KEGG: mpt:Mpe_A3405 fimbrial biogenesis protein.
       0.675
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.