STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU39073.1KEGG: mpt:Mpe_A3407 hypothetical protein. (206 aa)    
Predicted Functional Partners:
ADU39074.1
KEGG: mpt:Mpe_A3406 fimbrial biogenesis protein.
  
  
 0.887
ADU39072.1
KEGG: mpt:Mpe_A3408 pilus tip-associated protein.
  
  
 0.886
ADU39075.1
KEGG: mpt:Mpe_A3405 fimbrial biogenesis protein.
  
  
 0.881
ADU39077.1
KEGG: mpt:Mpe_A3403 fimbrial biogenesis protein.
  
  
 0.871
ADU39076.1
KEGG: mpt:Mpe_A3404 fimbrial biogenesis protein.
  
  
 0.859
ADU39069.1
PFAM: Roadblock/LC7 family protein; KEGG: ttu:TERTU_4500 roadblock/LC7 domain protein.
       0.675
ADU39070.1
PFAM: protein of unknown function ATP binding; KEGG: ttu:TERTU_4499 small GTP-binding protein.
       0.675
ADU39071.1
Hypothetical protein; KEGG: sus:Acid_6381 lipopolysaccharide heptosyltransferase II.
       0.675
ADU39068.1
KEGG: ttu:TERTU_4502 hypothetical protein.
       0.550
ADU37702.1
PFAM: Pyrrolo-quinoline quinone repeat-containing protein; KEGG: reh:H16_A2839 type IV pilus assembly protein, tip-associated adhesin PilY1.
  
  
 0.517
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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