STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU39078.1Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: vap:Vapar_5239 transcriptional regulator, LysR family. (304 aa)    
Predicted Functional Partners:
ADU34477.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rpf:Rpic12D_1450 transcriptional regulator, LysR family.
  
     0.654
ADU36335.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: tmz:Tmz1t_0418 transcriptional regulator, LysR family.
  
     0.644
ADU38370.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bur:Bcep18194_B2910 LysR family transcriptional regulator.
  
     0.640
ADU35563.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: vap:Vapar_1252 transcriptional regulator, LysR family.
  
     0.632
ADU38519.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dac:Daci_3612 LysR family transcriptional regulator.
  
     0.630
ADU39975.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: vap:Vapar_5102 transcriptional regulator, LysR family.
  
     0.614
ADU38660.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: vap:Vapar_3885 transcriptional regulator, LysR family.
  
     0.613
ADU34374.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cti:RALTA_A0206 putative transcriptional regulator, LysR family.
  
     0.612
ADU35688.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbr:BB2980 LysR family transcriptional regulator.
  
     0.612
ADU34742.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbr:BB0712 LysR family transcriptional regulator.
  
     0.610
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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