STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU39082.1KEGG: vap:Vapar_5793 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR. (216 aa)    
Predicted Functional Partners:
ADU39083.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: aeh:Mlg_1403 LysR family transcriptional regulator.
  
    0.548
ADU39261.1
KEGG: vap:Vapar_5307 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR.
  
     0.520
ADU37652.1
Regulatory protein MarR; KEGG: reh:H16_A2081 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR.
  
     0.513
ADU36116.1
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; binding-protein-dependent transport systems inner membrane component; KEGG: vap:Vapar_1735 substrate-binding region of ABC-type glycine betaine transport system.
  
  
 0.436
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.