STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU39133.1TIGRFAM: type III secretion apparatus H+-transporting two-sector ATPase; ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: cti:RALTA_B1253 SctN: non flagellar T3S system conserved protein. ATPase alpha/beta chains family; SMART: AAA ATPase. (457 aa)    
Predicted Functional Partners:
ADU39134.1
TIGRFAM: type III secretion apparatus protein, HrpE/YscL family; KEGG: cti:RALTA_B1254 SctL: non flagellar T3S system conserved protein.
 
 
 0.997
ADU39130.1
PFAM: type III secretion exporter; KEGG: cti:RALTA_B1250 SctU: non flagellar T3S system conserved inner membrane protein. FlhB/HrpN/YscU/spaS family.
 
 
 0.992
ADU39136.1
Type III secretion apparatus lipoprotein, YscJ/HrcJ family; KEGG: cti:RALTA_B1256 SctJ: non flagellar T3S system conserved transmembrane lipoprotein. YscJ/FliF family; TIGRFAM: type III secretion apparatus lipoprotein, YscJ/HrcJ family; PFAM: secretory protein YscJ/FliF family protein.
 
  
 0.974
ADU39131.1
KEGG: bac:BamMC406_4742 type III secretion protein SpaR/YscT/HrcT; TIGRFAM: type III secretion protein SpaR/YscT/HrcT; PFAM: type III secretion system inner membrane R protein.
 
  
 0.973
ADU39144.1
Type III secretion system apparatus protein YscQ/HrcQ; KEGG: cti:RALTA_B1263 SctQ: non flagellar T3S system conserved protein. FliN/MopA/SpaO family; TIGRFAM: type III secretion system apparatus protein YscQ/HrcQ; PFAM: surface presentation of antigens (SPOA) protein.
 
 
 0.962
ADU39143.1
Type III secretion protein, HrcV family; KEGG: cti:RALTA_B1262 SctV: non flagellar T3S system conserved transmembrane protein. FHIPEP (flagella/HR/invasion proteins export pore) family; TIGRFAM: type III secretion protein, HrcV family; PFAM: type III secretion FHIPEP protein.
 
  
 0.952
ADU34898.1
Signal transduction histidine kinase with CheB and CheR activity; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 
 0.931
ADU37255.1
Signal transduction histidine kinase with CheB and CheR activity; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 
 0.931
ADU39142.1
KEGG: bvi:Bcep1808_5343 HrpO family type III secretion protein; TIGRFAM: type III secretion protein, HrpO family; PFAM: export protein FliQ family 3.
 
  
 0.929
ADU39145.1
Yop virulence translocation R; KEGG: cti:RALTA_B1264 type III secretion system protein; TIGRFAM: Yop virulence translocation R; PFAM: type III secretion system inner membrane P protein.
 
  
 0.921
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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