STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU39232.1PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: vap:Vapar_4410 glyoxalase/bleomycin resistance protein/dioxygenase. (145 aa)    
Predicted Functional Partners:
ADU35823.1
PFAM: YCII-related; KEGG: vap:Vapar_1458 YCII-related.
 
    0.919
ADU39233.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: vap:Vapar_4412 glyoxalase/bleomycin resistance protein/dioxygenase.
 
    
0.655
ADU39231.1
PFAM: regulatory protein TetR; KEGG: vap:Vapar_4409 transcriptional regulator, TetR family.
 
     0.618
ADU37311.1
KEGG: vap:Vapar_2890 3-demethylubiquinone-9 3-methyltransferase.
 
  
 0.601
ADU39235.1
PFAM: protein of unknown function DUF1428; KEGG: vap:Vapar_4414 protein of unknown function DUF1428.
 
    0.517
ADU39234.1
KEGG: vap:Vapar_4413 drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1.
  
    0.515
ADU36615.1
Regulatory protein ArsR; KEGG: vap:Vapar_3232 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR.
 
    0.487
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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