STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU39415.1PFAM: electron transport protein SCO1/SenC; KEGG: dac:Daci_1998 electron transport protein SCO1/SenC. (205 aa)    
Predicted Functional Partners:
ADU39416.1
PFAM: protein of unknown function DUF461; KEGG: dac:Daci_2688 hypothetical protein.
 
   
 0.898
ADU39214.1
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.773
ADU37198.1
KEGG: vap:Vapar_1993 cytochrome c oxidase, subunit II; TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II.
 
 
 0.741
ADU35223.1
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: vap:Vapar_0948 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
 
 
 0.715
ADU39585.1
PFAM: protein of unknown function DUF461; nuclear export factor GLE1; KEGG: vap:Vapar_4773 protein of unknown function DUF461.
 
   
 0.713
ADU39211.1
PFAM: cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: vap:Vapar_4389 cytochrome c oxidase assembly protein.
 
 
 0.690
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
  
 0.651
ADU39732.1
PFAM: Redoxin domain protein; KEGG: vap:Vapar_4901 redoxin domain protein.
 
 
 0.621
ADU39205.1
PFAM: cytochrome oxidase assembly; KEGG: vap:Vapar_4383 cytochrome oxidase assembly.
 
 
 0.620
ADU35495.1
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
   
 0.590
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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