Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KTF04460.1Hypothetical protein. (341 aa)    
Predicted Functional Partners:
KTF03531.1
Hypothetical protein.
  
     0.676
KTF03745.1
Hypothetical protein.
  
     0.619
mshD_3
Mycothiol acetyltransferase.
  
     0.618
KTF04254.1
Hypothetical protein.
  
     0.612
KTF03777.1
Ribonuclease BN-like family protein.
  
     0.598
KTF04632.1
Hypothetical protein.
  
     0.595
KTF03912.1
Aldose 1-epimerase.
  
   
 0.565
mshD_2
Mycothiol acetyltransferase.
  
     0.558
KTF04459.1
Hypothetical protein.
       0.553
KTF04571.1
Bacterial regulatory protein, tetR family.
  
     0.546
Your Current Organism:
Trueperella bernardiae
NCBI taxonomy Id: 59561
Other names: ATCC 51727, Actinomyces bernardiae, Arcanibacterium bernardiae, Arcanobacterium bernardiae, CCUG 33419, CDC coryneform group 2, CIP 104252, DSM 9152, LCDC 89-0504, LMG 18721, LMG:18721, T. bernardiae
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