Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mviN_1Putative peptidoglycan biosynthesis protein MviN. (718 aa)    
Predicted Functional Partners:
KTF04539.1
Hypothetical protein.
 
     0.859
trxB
Thioredoxin reductase.
  
    0.760
KTF04996.1
Hypothetical protein.
 
     0.757
KTF04942.1
Hypothetical protein.
  
     0.750
KTF04320.1
Hypothetical protein.
  
     0.750
KTF04995.1
Hypothetical protein.
 
     0.739
KTF04852.1
Hypothetical protein.
  
     0.730
KTF04857.1
Hypothetical protein.
  
     0.723
KTF04241.1
Hypothetical protein.
  
     0.721
KTF03937.1
Alpha/beta hydrolase family protein.
  
     0.704
Your Current Organism:
Trueperella bernardiae
NCBI taxonomy Id: 59561
Other names: ATCC 51727, Actinomyces bernardiae, Arcanibacterium bernardiae, Arcanobacterium bernardiae, CCUG 33419, CDC coryneform group 2, CIP 104252, DSM 9152, LCDC 89-0504, LMG 18721, LMG:18721, T. bernardiae
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.