Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
bprBacillopeptidase F precursor; Belongs to the peptidase S8 family. (1707 aa)    
Predicted Functional Partners:
KTF03631.1
Hypothetical protein.
  
     0.662
rocA
1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
  
 0.573
spoIIIE
DNA translocase SpoIIIE.
  
 
 0.490
KTF04887.1
Hypothetical protein.
  
 0.479
KTF04675.1
Hypothetical protein.
  
     0.473
KTF04092.1
N-acetylmuramoyl-L-alanine amidase.
  
 
 0.440
cna_1
Collagen adhesin precursor.
  
 
 0.440
KTF03615.1
Hypothetical protein.
  
 
 0.440
KTF03616.1
Hypothetical protein.
  
 
 0.440
KTF03617.1
Hypothetical protein.
  
 
 0.440
Your Current Organism:
Trueperella bernardiae
NCBI taxonomy Id: 59561
Other names: ATCC 51727, Actinomyces bernardiae, Arcanibacterium bernardiae, Arcanobacterium bernardiae, CCUG 33419, CDC coryneform group 2, CIP 104252, DSM 9152, LCDC 89-0504, LMG 18721, LMG:18721, T. bernardiae
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