Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
KTF03805.1Bacterial type II secretion system protein F domain protein. (285 aa)    
Predicted Functional Partners:
KTF03803.1
Putative conjugal transfer protein.
 
 
 0.997
KTF03804.1
Hypothetical protein.
 
  
 0.990
KTF04634.1
Putative conjugal transfer protein.
 
 
 0.984
KTF04635.1
Hypothetical protein.
  
 
 0.975
KTF04636.1
Hypothetical protein.
  
 
 0.975
KTF03806.1
Hypothetical protein.
 
     0.940
KTF03808.1
Hypothetical protein.
 
     0.936
KTF03807.1
Hypothetical protein.
 
    0.916
KTF03473.1
SAF domain protein.
  
  
 0.820
KTF04319.1
Hypothetical protein.
 
    0.767
Your Current Organism:
Trueperella bernardiae
NCBI taxonomy Id: 59561
Other names: ATCC 51727, Actinomyces bernardiae, Arcanibacterium bernardiae, Arcanobacterium bernardiae, CCUG 33419, CDC coryneform group 2, CIP 104252, DSM 9152, LCDC 89-0504, LMG 18721, LMG:18721, T. bernardiae
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