Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dmsB_1Anaerobic dimethyl sulfoxide reductase chain B. (219 aa)    
Predicted Functional Partners:
dmsA_2
Dimethyl sulfoxide reductase DmsA precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.996
dmsA_1
Dimethyl sulfoxide reductase DmsA precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.992
dmsC_1
Anaerobic dimethyl sulfoxide reductase chain C.
 
  
 0.948
dmsB_2
Anaerobic dimethyl sulfoxide reductase chain B.
  
  
 
0.900
tuf
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
   0.815
dmsC_2
Anaerobic dimethyl sulfoxide reductase chain C.
 
  
 0.775
dmsD
Tat proofreading chaperone DmsD.
 
  
 0.751
KTF04150.1
Hypothetical protein; MDMPI C-terminal domain.
  
   0.732
KTF04868.1
Putative type I restriction enzymeP M protein.
   
    0.650
preT
NAD-dependent dihydropyrimidine dehydrogenase subunit PreT.
     
 0.492
Your Current Organism:
Trueperella bernardiae
NCBI taxonomy Id: 59561
Other names: ATCC 51727, Actinomyces bernardiae, Arcanibacterium bernardiae, Arcanobacterium bernardiae, CCUG 33419, CDC coryneform group 2, CIP 104252, DSM 9152, LCDC 89-0504, LMG 18721, LMG:18721, T. bernardiae
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