Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
glkA_2Glucokinase. (312 aa)    
Predicted Functional Partners:
glcK
Glucokinase.
  
  
 
0.926
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.914
glkA_1
Glucokinase.
  
  
 
0.911
pgm
Phosphoglucomutase.
     
 0.903
malH
Maltose-6'-phosphate glucosidase MalH.
    
  0.900
yeaD
Putative glucose-6-phosphate 1-epimerase.
     
  0.900
KTF03912.1
Aldose 1-epimerase.
    
  0.900
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
    
 0.852
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
  
 
  0.809
tkt
Transketolase; Belongs to the transketolase family.
  
 
 0.804
Your Current Organism:
Trueperella bernardiae
NCBI taxonomy Id: 59561
Other names: ATCC 51727, Actinomyces bernardiae, Arcanibacterium bernardiae, Arcanobacterium bernardiae, CCUG 33419, CDC coryneform group 2, CIP 104252, DSM 9152, LCDC 89-0504, LMG 18721, LMG:18721, T. bernardiae
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