Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KTF03476.1Universal stress protein. (313 aa)    
Predicted Functional Partners:
KTF03475.1
Hypothetical protein.
 
     0.646
KTF04375.1
Hypothetical protein.
  
     0.621
KTF03477.1
Dipeptidyl-peptidase 6.
       0.522
KTF04376.1
Hypothetical protein.
  
     0.489
KTF03534.1
Hypothetical protein.
  
     0.477
adaB
Methylated-DNA--protein-cysteine methyltransferase, inducible.
  
  
 0.467
KTF04666.1
Hypothetical protein.
  
     0.458
pgsA1
CDP-diacylglycerol--inositol 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.442
KTF04124.1
pH-sensitive adenylate cyclase.
 
     0.440
KTF03474.1
Hypothetical protein.
       0.409
Your Current Organism:
Trueperella bernardiae
NCBI taxonomy Id: 59561
Other names: ATCC 51727, Actinomyces bernardiae, Arcanibacterium bernardiae, Arcanobacterium bernardiae, CCUG 33419, CDC coryneform group 2, CIP 104252, DSM 9152, LCDC 89-0504, LMG 18721, LMG:18721, T. bernardiae
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