Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
tetRTetracycline repressor protein class H. (225 aa)    
Predicted Functional Partners:
ymfD
Bacillibactin exporter.
 
    0.872
KTF03732.1
FtsX-like permease family protein.
  
     0.640
yclQ_2
Putative ABC transporter solute-binding protein YclQ precursor.
  
     0.574
KTF03368.1
Hypothetical protein.
  
     0.574
yhdJ_2
DNA adenine methyltransferase YhdJ.
  
   0.570
metK_3
S-adenosylmethionine synthase; Belongs to the AdoMet synthase family.
       0.524
msbA
Lipid A export ATP-binding/permease protein MsbA.
  
     0.517
KTF03634.1
Hypothetical protein; Cpl-7 lysozyme C-terminal domain.
  
     0.511
ydfJ
Membrane protein YdfJ.
 
    0.507
KTF03366.1
Hypothetical protein.
  
     0.503
Your Current Organism:
Trueperella bernardiae
NCBI taxonomy Id: 59561
Other names: ATCC 51727, Actinomyces bernardiae, Arcanibacterium bernardiae, Arcanobacterium bernardiae, CCUG 33419, CDC coryneform group 2, CIP 104252, DSM 9152, LCDC 89-0504, LMG 18721, LMG:18721, T. bernardiae
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