Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDY31601.1 | SDY53375.1 | SAMN05421643_107115 | SAMN05421643_11355 | acyl-CoA thioesterase-1. | Glucose/arabinose dehydrogenase, beta-propeller fold. | 0.450 |
SDY50998.1 | SDY53375.1 | SAMN05421643_11264 | SAMN05421643_11355 | Protein kinase domain-containing protein. | Glucose/arabinose dehydrogenase, beta-propeller fold. | 0.476 |
SDY53375.1 | SDY31601.1 | SAMN05421643_11355 | SAMN05421643_107115 | Glucose/arabinose dehydrogenase, beta-propeller fold. | acyl-CoA thioesterase-1. | 0.450 |
SDY53375.1 | SDY50998.1 | SAMN05421643_11355 | SAMN05421643_11264 | Glucose/arabinose dehydrogenase, beta-propeller fold. | Protein kinase domain-containing protein. | 0.476 |
SDY53375.1 | SDY53397.1 | SAMN05421643_11355 | SAMN05421643_11356 | Glucose/arabinose dehydrogenase, beta-propeller fold. | Predicted ATPase. | 0.509 |
SDY53375.1 | SDY53416.1 | SAMN05421643_11355 | SAMN05421643_11357 | Glucose/arabinose dehydrogenase, beta-propeller fold. | Hypothetical protein. | 0.509 |
SDY53397.1 | SDY53375.1 | SAMN05421643_11356 | SAMN05421643_11355 | Predicted ATPase. | Glucose/arabinose dehydrogenase, beta-propeller fold. | 0.509 |
SDY53397.1 | SDY53416.1 | SAMN05421643_11356 | SAMN05421643_11357 | Predicted ATPase. | Hypothetical protein. | 0.950 |
SDY53416.1 | SDY53375.1 | SAMN05421643_11357 | SAMN05421643_11355 | Hypothetical protein. | Glucose/arabinose dehydrogenase, beta-propeller fold. | 0.509 |
SDY53416.1 | SDY53397.1 | SAMN05421643_11357 | SAMN05421643_11356 | Hypothetical protein. | Predicted ATPase. | 0.950 |