STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL53085.1PFAM: protein of unknown function DUF1130; KEGG: dma:DMR_00970 hypothetical protein. (114 aa)    
Predicted Functional Partners:
EFL53086.1
KEGG: dvu:DVU0193 hypothetical protein.
       0.769
EFL53087.1
PFAM: terminase GpA; KEGG: dvu:DVU2185 terminase, large subunit, putative.
       0.767
EFL53088.1
KEGG: dvl:Dvul_1057 phage transcriptional regulator, AlpA.
       0.762
EFL53083.1
KEGG: sml:Smlt3075 hypothetical protein.
       0.520
EFL53084.1
Hypothetical protein; KEGG: variant erythrocyte surface antigen-1, alpha subunit.
       0.520
EFL53089.1
KEGG: dma:DMR_23690 hypothetical protein.
       0.489
EFL53090.1
PFAM: HicB family protein; KEGG: dma:DMR_23700 hypothetical protein.
       0.489
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.