STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL53152.1PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: dma:DMR_22110 type I phosphodiesterase/nucleotide pyrophosphatase family protein. (625 aa)    
Predicted Functional Partners:
EFL53153.1
KEGG: dma:DMR_22100 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR.
       0.664
EFL53154.1
PFAM: major facilitator superfamily MFS_1; KEGG: dma:DMR_22090 major facilitator superfamily protein.
       0.420
EFL49887.1
MATE efflux family protein; KEGG: dma:DMR_06930 multi antimicrobial extrusion protein MatE family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE.
  
     0.416
EFL49456.1
KEGG: dal:Dalk_4189 hypothetical protein.
  
     0.405
EFL50332.1
PFAM: lipolytic protein G-D-S-L family; KEGG: dma:DMR_02790 hypothetical protein.
  
     0.401
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.