STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL52802.1KEGG: dma:DMR_04310 hypothetical membrane protein. (281 aa)    
Predicted Functional Partners:
EFL51138.1
KEGG: dma:DMR_36040 hypothetical membrane protein.
  
     0.759
EFL50214.1
KEGG: dma:DMR_12720 hypothetical protein.
  
     0.745
EFL50213.1
KEGG: dma:DMR_12710 acetyl-CoA carboxylase carboxyl transferase alpha/beta subunit; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region.
  
     0.665
EFL52803.1
PFAM: protein of unknown function UPF0066; KEGG: dma:DMR_04300 hypothetical protein.
       0.658
EFL50989.1
KEGG: dma:DMR_08120 hypothetical protein.
  
     0.583
EFL49735.1
KEGG: dma:DMR_17590 hypothetical protein.
  
     0.557
EFL52801.1
TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; KEGG: dma:DMR_04320 methyl-accepting chemotaxis protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein.
       0.506
EFL50893.1
KEGG: dds:Ddes_0369 hypothetical protein.
  
     0.505
EFL50151.1
KEGG: dma:DMR_45310 hypothetical protein.
  
     0.500
EFL49542.1
KEGG: dma:DMR_16410 hypothetical protein.
  
     0.500
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.