STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL52876.1Alkylhydroperoxidase like protein, AhpD family; KEGG: dba:Dbac_0462 carboxymuconolactone decarboxylase; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase. (105 aa)    
Predicted Functional Partners:
EFL50222.1
TIGRFAM: 2-hydroxy-3-oxopropionate reductase; KEGG: dma:DMR_35000 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding.
  
 
 0.770
EFL53073.1
KEGG: dma:DMR_20070 pyruvate-flavodoxin oxidoreductase; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin iron-sulfur binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
  
 
  0.745
EFL52875.1
PFAM: Rubrerythrin; KEGG: dma:DMR_08470 rubrerythrin.
  
  
 0.731
EFL51701.1
KEGG: dma:DMR_46260 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase-like; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
 
 0.724
EFL49484.1
PFAM: Carboxymuconolactone decarboxylase; KEGG: stp:Strop_3952 hypothetical protein.
    
 0.713
EFL52138.1
PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein; KEGG: dma:DMR_18800 succinyl-CoA synthetase beta chain/succinyl-CoA synthetase alpha chain.
     
 0.684
EFL52877.1
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: dma:DMR_08480 AhpC/TSA family protein.
     
 0.670
EFL49925.1
PFAM: Cupin 2 conserved barrel domain protein; KEGG: dma:DMR_35390 hypothetical protein.
 
  
 0.666
EFL50213.1
KEGG: dma:DMR_12710 acetyl-CoA carboxylase carboxyl transferase alpha/beta subunit; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region.
    
  0.665
EFL51238.1
PFAM: alpha/beta hydrolase fold; KEGG: sfu:Sfum_3416 alpha/beta hydrolase fold.
  
 
 0.630
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.