STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL52935.1KEGG: dma:DMR_04450 hypothetical protein; PFAM: Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region. (416 aa)    
Predicted Functional Partners:
EFL52196.1
KEGG: dde:Dde_1941 response regulator receiver sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein.
   
 0.730
EFL52936.1
Porphobilinogen synthase; KEGG: dma:DMR_04460 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
       0.682
EFL50436.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dma:DMR_25610 GGDEF domain protein; SMART: GGDEF domain containing protein.
 
 
  0.617
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
     0.613
EFL50092.1
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; CBS domain containing protein; PAS fold-4 domain protein; response regulator receiver; Hpt domain protein; KEGG: dma:DMR_34940 two-component hybrid sensor and regulator; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; CBS domain containing protein; PAC repeat-containing protein; response regulator receiver; Hpt domain protein.
   
 0.609
EFL50904.1
Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; PAS fold-3 domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: dma:DMR_34900 putative two-component hybrid sensor and regulator; SMART: response regulator receiver; PAS domain containing protein; histidine kinase A domain protein.
    
  0.602
EFL50088.1
Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; PAS fold-3 domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: dma:DMR_34900 putative two-component hybrid sensor and regulator; SMART: response regulator receiver; PAS domain containing protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein.
    
  0.602
flgI
Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
     0.547
EFL51987.1
Response regulator receiver protein; KEGG: dma:DMR_23110 two-component hybrid sensor and regulator; PFAM: response regulator receiver; SMART: response regulator receiver.
   
 0.521
EFL51561.1
KEGG: dma:DMR_11570 response regulator receiver protein; PFAM: response regulator receiver; Hpt domain protein; SMART: response regulator receiver.
   
 0.521
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.