STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL52519.1KEGG: dma:DMR_42830 hypothetical protein. (316 aa)    
Predicted Functional Partners:
EFL52518.1
KEGG: dma:DMR_42840 hypothetical protein.
  
 0.969
EFL52521.1
KEGG: dma:DMR_42810 hypothetical membrane protein.
 
     0.928
EFL49224.1
ABC transporter related protein; KEGG: dma:DMR_02120 putative secretion ATP-binding protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
  
 0.924
EFL52516.1
PFAM: protein of unknown function DUF214; KEGG: dma:DMR_42860 putative ABC transporter permease protein.
 
  
 0.912
EFL49655.1
PFAM: outer membrane efflux protein; KEGG: dma:DMR_03670 outer membrane efflux protein.
 
 0.881
EFL52610.1
KEGG: gme:Gmet_1666 RND efflux system, outer membrane lipoprotein, NodT; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein.
  
 0.862
EFL52520.1
KEGG: dma:DMR_42820 hypothetical protein.
 
     0.843
EFL52517.1
KEGG: dma:DMR_42850 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.833
EFL52646.1
PFAM: polysaccharide biosynthesis protein; KEGG: dma:DMR_03150 hypothetical membrane protein.
 
     0.733
EFL52522.1
PFAM: glycosyl transferase family 2; KEGG: dma:DMR_42800 glycosyltransferase.
     
 0.702
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
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