STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL52595.1PFAM: Lytic transglycosylase catalytic; KEGG: dma:DMR_42530 putative transglycosylase. (739 aa)    
Predicted Functional Partners:
EFL50165.1
SMART: AAA ATPase; TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; KEGG: dma:DMR_45080 flagellum-specific ATP synthase; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region.
  
 
 0.789
EFL49837.1
WD40 domain protein beta Propeller; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
  
 0.741
EFL52759.1
N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; KEGG: dma:DMR_43330 putative N-acetylmuramoyl-L-alanine amidase; SMART: cell wall hydrolase/autolysin.
    
 0.740
EFL53212.1
Cell wall hydrolase/autolysin; KEGG: dma:DMR_21740 N-acetylmuramoyl-L-alanine amidase family protein; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin.
    
 0.731
fliE
KEGG: dma:DMR_45040 flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE.
  
 
 0.726
EFL49730.1
Cell wall hydrolase/autolysin; KEGG: dma:DMR_17540 N-acetylmuramoyl-L-alanine amidase family protein; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin.
    
 0.703
EFL49255.1
KEGG: dma:DMR_39000 putative transglycosylase; PFAM: Lytic transglycosylase catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
 
 
 0.699
EFL52922.1
Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
  
 0.681
EFL49710.1
KEGG: dma:DMR_28440 hypothetical protein; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat.
  
  
 0.660
EFL52907.1
PFAM: protein of unknown function DUF177; KEGG: dma:DMR_39920 hypothetical protein.
  
    0.645
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.