STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL52204.1PFAM: glycosyl transferase family 2; KEGG: bid:Bind_0352 glycosyl transferase family protein. (381 aa)    
Predicted Functional Partners:
EFL52206.1
PFAM: Radical SAM domain protein; KEGG: scl:sce6682 hypothetical protein.
 
     0.814
EFL52202.1
PFAM: acylneuraminate cytidylyltransferase; KEGG: dau:Daud_0021 acylneuraminate cytidylyltransferase.
  
  
 0.800
EFL52201.1
PFAM: glycosyl transferase family 2; KEGG: bid:Bind_0591 glycosyl transferase family protein.
 
    
0.784
EFL52205.1
PFAM: Radical SAM domain protein; KEGG: bid:Bind_0353 hypothetical protein.
       0.778
EFL52203.1
Hypothetical protein; KEGG: mab:MAB_0163c phosphotransferase.
       0.773
EFL52199.1
PFAM: Radical SAM domain protein; KEGG: scl:sce6682 hypothetical protein.
 
     0.754
EFL51390.1
PFAM: glycosyl transferase family 2; KEGG: dma:DMR_26170 putative glycosyltransferase.
  
     0.728
EFL49567.1
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: dma:DMR_28260 putative glycosyltransferase; PFAM: sugar transferase.
 
  
 0.702
EFL52207.1
PFAM: Methyltransferase type 11; KEGG: sco:SCO1731 hypothetical protein.
     
 0.688
EFL49425.1
PFAM: amine oxidase; KEGG: dma:DMR_02930 hypothetical protein.
 
 
 0.677
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
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