STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL51962.1PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; KEGG: dma:DMR_20430 hypothetical protein. (244 aa)    
Predicted Functional Partners:
EFL49546.1
PFAM: glycosyl transferase family 9; KEGG: dma:DMR_16450 hypothetical protein.
  
  
  0.824
EFL50172.1
KEGG: dma:DMR_45010 hypothetical protein; PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide repeat.
  
  
 0.814
EFL49875.1
PFAM: glycosyl transferase family 9; KEGG: dma:DMR_13720 putative glycosyltransferase.
  
  
  0.801
EFL50982.1
KEGG: dma:DMR_38060 hypothetical protein.
  
  
  0.791
EFL50427.1
PFAM: Tetratricopeptide TPR_2 repeat protein; response regulator receiver; TPR repeat-containing protein; KEGG: dma:DMR_25500 hypothetical protein.
 
  
  0.769
EFL50434.1
KEGG: dma:DMR_25590 hypothetical protein.
  
     0.769
EFL50303.1
PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; KEGG: dma:DMR_31680 hypothetical protein.
  
     0.769
EFL50287.1
TIGRFAM: flagella basal body P-ring formation protein FlgA; KEGG: dma:DMR_31550 putative flagella basal body P-ring formation protein FlgA.
  
     0.767
EFL52776.1
KEGG: dma:DMR_30860 hypothetical protein.
  
     0.763
EFL49874.1
PFAM: flagellar hook-length control protein; KEGG: dma:DMR_13730 putative flagellar hook-length control protein.
 
     0.762
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.