STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL51994.1KEGG: gur:Gura_3328 ABC-type Fe3+ transport system periplasmic component-like protein. (399 aa)    
Predicted Functional Partners:
EFL51998.1
PFAM: periplasmic binding protein; KEGG: nha:Nham_0956 periplasmic binding protein.
 
  
 0.893
EFL51997.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nha:Nham_0957 TonB-dependent receptor.
 
  
 0.877
EFL49675.1
KEGG: dma:DMR_43480 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
  0.871
EFL51996.1
KEGG: oca:OCAR_4561 putative iron compound ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.849
EFL51995.1
PFAM: transport system permease protein; KEGG: pca:Pcar_0154 ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
 0.799
EFL49676.1
PFAM: cobalamin synthesis protein P47K; KEGG: dma:DMR_43470 putative hydrogenase accessory protein.
 
     0.795
EFL52554.1
KEGG: azc:AZC_0785 putative ABC transporter; PFAM: ABC transporter related; binding-protein-dependent transport systems inner membrane component; Transport-associated OB domain protein; SMART: AAA ATPase; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.786
EFL49525.1
PFAM: OmpA/MotB domain protein; KEGG: dma:DMR_16220 chemotaxis protein MotB.
  
 
   0.644
EFL50210.1
PFAM: OmpA/MotB domain protein; KEGG: dma:DMR_12680 chemotaxis protein MotB.
  
 
   0.642
EFL51987.1
Response regulator receiver protein; KEGG: dma:DMR_23110 two-component hybrid sensor and regulator; PFAM: response regulator receiver; SMART: response regulator receiver.
    
 0.627
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
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