STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL52045.1KEGG: bcv:Bcav_3372 amidohydrolase 2. (107 aa)    
Predicted Functional Partners:
EFL52046.1
Hypothetical protein; KEGG: mmi:MMAR_2097 PE-PGRS family protein, PE_PGRS33.
       0.773
EFL52047.1
KEGG: aba:Acid345_4177 hypothetical protein.
       0.773
EFL52048.1
Hypothetical protein.
       0.773
EFL52043.1
KEGG: mei:Msip34_1614 hypothetical protein.
       0.746
EFL52044.1
Hypothetical protein.
       0.746
EFL52049.1
Hypothetical protein; KEGG: swi:Swit_2305 LysR family transcriptional regulator.
      
0.746
EFL52050.1
Hypothetical protein; KEGG: mtc:MT3615.3 PE_PGRS family protein.
       0.746
EFL52041.1
KEGG: bcv:Bcav_3372 amidohydrolase 2.
      
0.666
EFL52042.1
Hypothetical protein; KEGG: mbt:JTY_1774 PE-PGRS family protein.
       0.666
EFL52035.1
PFAM: GP46 family protein; KEGG: dvu:DVU2727 hypothetical protein.
       0.644
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.