STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL51862.1TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; KEGG: dma:DMR_05730 L-tartrate dehydratase alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region. (279 aa)    
Predicted Functional Partners:
EFL51861.1
KEGG: dma:DMR_05740 L-tartrate dehydratase beta subunit; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region.
 
 0.999
EFL52157.1
KEGG: dma:DMR_34310 L-tartrate dehydratase beta subunit; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region.
 
 0.996
EFL51859.1
TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: chy:CHY_0064 fumarate reductase, iron-sulfur subunit.
  
 
 0.973
EFL51860.1
KEGG: wsu:WS1920 succinate dehydrogenase flavoprotein subunit; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein.
  
 
 0.946
EFL52138.1
PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein; KEGG: dma:DMR_18800 succinyl-CoA synthetase beta chain/succinyl-CoA synthetase alpha chain.
  
 
 0.904
EFL51858.1
CoB--CoM heterodisulfide reductase; KEGG: chy:CHY_0065 putative succinate/fumarate oxidoreductase; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein.
    
  0.880
EFL51533.1
Succinate dehydrogenase; KEGG: eca:ECA0910 putative flavoprotein subunit of a reductase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein.
  
 
 0.801
EFL52161.1
PFAM: Fumarate reductase respiratory complex; KEGG: dma:DMR_34270 fumarate reductase cytochrome b subunit.
  
 
 0.793
EFL52159.1
KEGG: dma:DMR_34290 fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein.
  
 
 0.783
EFL52160.1
TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; KEGG: dma:DMR_34280 fumarate reductase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein.
  
 
 0.773
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
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