STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL51655.1KEGG: dma:DMR_44630 hypothetical protein. (199 aa)    
Predicted Functional Partners:
EFL51651.1
PFAM: inner-membrane translocator; KEGG: dma:DMR_45590 branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
       0.476
EFL51652.1
PFAM: inner-membrane translocator; KEGG: dma:DMR_45580 branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
       0.476
EFL51653.1
KEGG: dma:DMR_45570 branched-chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.476
EFL51654.1
KEGG: swi:Swit_1301 hypothetical protein.
       0.476
EFL51817.1
PFAM: type IV pilus assembly PilZ; KEGG: dma:DMR_18170 hypothetical protein.
  
     0.421
EFL50047.1
KEGG: dma:DMR_33390 hypothetical protein.
  
     0.409
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
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