STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL51715.1Band 7 protein; KEGG: dma:DMR_00100 hypothetical protein; PFAM: band 7 protein; SMART: band 7 protein. (286 aa)    
Predicted Functional Partners:
EFL51947.1
KEGG: dma:DMR_25740 cell division protein FtsH.
   
 0.977
ftsH
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
  
 0.977
EFL50448.1
ATP-dependent metalloprotease FtsH; KEGG: dma:DMR_25740 cell division protein FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; Belongs to the AAA ATPase family.
   
 0.977
EFL51714.1
PFAM: protein of unknown function DUF107; KEGG: dma:DMR_00090 hypothetical membrane protein.
 
  
 0.974
nuoB-2
NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
   
 
 0.910
EFL53051.1
PFAM: Rhomboid family protein; KEGG: dma:DMR_23600 rhomboid family protein.
   
 0.811
EFL51712.1
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.
  
  
 0.808
EFL51877.1
PFAM: Rhomboid family protein; KEGG: dma:DMR_19850 hypothetical membrane protein.
   
 0.807
EFL51380.1
PFAM: peptidase M16 domain protein; KEGG: dma:DMR_26760 putative M16B family peptidase; Belongs to the peptidase M16 family.
  
 0.806
EFL49598.1
PFAM: peptidase M16 domain protein; KEGG: dma:DMR_38350 putative M16B family peptidase.
  
 0.806
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
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