STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL51752.1KEGG: dvl:Dvul_2921 hypothetical protein. (197 aa)    
Predicted Functional Partners:
EFL51065.1
PFAM: type IV pilus assembly PilZ; KEGG: dma:DMR_17480 hypothetical protein.
  
     0.665
EFL52037.1
PFAM: Protein of unknown function DUF2313, Mu protein gp48; KEGG: dvu:DVU2729 tail protein, putative.
  
     0.625
EFL52026.1
PFAM: Mu tail sheath family protein; KEGG: dvm:DvMF_0740 Mu tail sheath family protein.
  
     0.602
EFL51753.1
KEGG: dma:DMR_02190 hypothetical protein.
       0.590
EFL52033.1
KEGG: dvu:DVU2724 phage baseplate assembly protein V, putative; TIGRFAM: phage baseplate assembly protein V; PFAM: Mu Gp45 domain protein.
  
     0.584
EFL50916.1
PFAM: periplasmic solute binding protein; KEGG: dvu:DVU0102 cation ABC transporter, periplasmic binding protein.
  
     0.568
EFL51754.1
KEGG: dma:DMR_02210 HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein.
       0.550
EFL52031.1
PFAM: DNA circulation family protein; KEGG: dvu:DVU2722 hypothetical protein.
  
     0.503
EFL52032.1
KEGG: dvm:DvMF_0745 putative phage tail protein.
  
     0.493
EFL52009.1
KEGG: dvm:DvMF_0714 bacteriophage DNA transposition B protein.
  
     0.485
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
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