STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL51779.1PFAM: Methyltransferase type 11; KEGG: dma:DMR_00260 hypothetical protein. (243 aa)    
Predicted Functional Partners:
EFL50915.1
PFAM: Methyltransferase type 11; KEGG: dvl:Dvul_2861 methyltransferase type 12.
 
  
 0.674
EFL52770.1
NADH dehydrogenase (quinone); KEGG: dma:DMR_02470 NADH-quinone oxidoreductase chain F; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; 4Fe-4S ferredoxin iron-sulfur binding domain protein.
    
 0.633
EFL52166.1
NADH dehydrogenase (quinone); KEGG: dma:DMR_07840 putative NAD-reducing hydrogenase subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; 4Fe-4S ferredoxin iron-sulfur binding domain protein.
    
 0.633
EFL52774.1
Radical SAM domain protein; KEGG: dma:DMR_01800 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
  
 
 0.579
EFL51486.1
Radical SAM domain protein; KEGG: csc:Csac_0491 biotin synthase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
  
 
 0.579
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
  
 
 0.579
EFL49164.1
PFAM: glycosyl transferase family 2; KEGG: dvm:DvMF_1887 glycosyl transferase family 2.
  
 0.578
EFL51792.1
TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: dma:DMR_33050 phosphoserine phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; amino acid-binding ACT domain protein.
   
  0.570
bioD
Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.
  
 
 0.565
EFL52515.1
Glycine C-acetyltransferase; KEGG: dma:DMR_42870 2-amino-3-ketobutyrate coenzyme A; PFAM: aminotransferase class I and II.
  
 
 0.546
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
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